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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015799669.1_cds_XP_016466234.1_5854
CDS Infomation

[gene=LOC107788982] [db_xref=GeneID:107788982] [protein=eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like isoform X2] [protein_id=XP_016466234.1] [location=complement(join(15537..15595,15684..15756,16212..16376,16477..16541,17939..18074,18168..18273,19249..19399,20231..20295,20385..20539,20742..20804,22183..22254,22384..22429,23476..23587,24230..24382,26813..26884,27035..27079,27306..27309))] [gbkey=CDS]
Sequence

ATGGATAATATTGAAGAGGACATCAAGGCACTGCAGCTCGACTCATCCGAAGATAACGTG
ATGGTTAACGTGGAAGACGGAAAACCCGAGGAAGCTATAAAACCTGAAAAAACTAATGGA
GAGTTGAAAGATGAAGCACATCCGGACTTAGAGCCAAAGAATGTTGAGCCAAAGGGTATT
GCTGGCAAAGAAGCTTCACCCCCAGAAGATATTCAAGATGAGGTTGAAGTCAATAAAAAG
AGACACCTGAATGTGGTATTTATTGGTCATGTGGATGCTGGAAAGTCAACAATTGGAGGA
CAAATACTATTACTTAGTGGTCAAGTTGATGACCGTACTATACAGAAGTACGAGAGAGAA
GCAAAGGATAAAAACAGAGAGAGCTGGTATATGGCCTATATAATGGATACAAATGAAGAG
GAGAGGGTGAAGGGAATAACAGTTGAAGTAGGAAGAGCACATTTTGAAACAGATACTACA
AGATTTACAATTCTGGATGCCCCGGGTCATAAGAGCTATGTTCCCAATATGATCAGTGGA
GCATCTCAAGCCGATATAGGCGTGCTGGTTATATCGGCTAGAAAGGGTGAATTTGAAACT
GGATATGAAAGAGGTGGGCAAACACGTGAACATGTTCAACTGGCAAAGACTCTAGGAGTT
ACAAAGCTTCTTGTTGTTGTAAATAAGATGGATGATCCTACTGTCAATTGGTCTAAAGAA
AGGTACGATGAGATCGAGTCAAAAATGGTTCCATTCTTGAGGTCGTCTGGGTACAATGTC
AAGAAAGATGTTCAGTTCCTTCCAATCTCTGGGCTTTTGGGTTCAAATCTGAAAACTAGA
ATGGAGAAAAGTGTATGCCCATGGTGGAATGGTCCATGTCTCTTTGAAACCCTTGATGCT
GTCGAAGTTCCACCTAGAGATCCTAATGGTCCACTAAGAATGCCTATTATTGACAAATTC
AAAGACATGGGAACTGTCGTTATGGGTAAAATTGAGTCTGGGAGCATACGTGAAGGTGAT
AATCTACTGATTATGCCAAATAAGGCTGCTGTAAAAGTTCTTGCCATATTCTGTGATGAA
GACAAAGTAAGGCATGTTGGTCCTGGGGAAAACGTACGTGTCAGGTTATCTGGAGTAGAG
GAAGATGACATTTTGTCAGGCTTTGTCTTGTGCAGTGTTGCAAAGCCAATACATGCAGTT
ACTGAGTTTGTTGCACAGTTACAGATCCTTGAGCTGTTGGACAATGCTATTTTTACTGCT
GGCTACAAAGCTGTGTTGCACATCCATTCTGTGGTTGAGGAATGTGAGATTGTTGAACTG
ATGCAGCAGATTGATTTAAAGACAAAGAAACCTATGAAGAAAAAACCTCTGTTTGTAAAG
AACGGTGCTATTGTTTTATGCCGTGTTCAGGTGAATAATCTGATATGTGTAGAGAAGTTC
TCCGACTTTGCACAACTTGGACGATTCACTCTTCGCACTGAAGGGAAAACTGTTGCTGTG
GGGAAAATTACTGCACTGCCTACTGTTGCTGATAATGCATAA

Peptide Sequence

PEP ID

XP_016466234.1
PEP Infomation

PREDICTED: eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like isoform X2 [Nicotiana tabacum]
Sequence

MDNIEEDIKALQLDSSEDNVMVNVEDGKPEEAIKPEKTNGELKDEAHPDLEPKNVEPKGI
AGKEASPPEDIQDEVEVNKKRHLNVVFIGHVDAGKSTIGGQILLLSGQVDDRTIQKYERE
AKDKNRESWYMAYIMDTNEEERVKGITVEVGRAHFETDTTRFTILDAPGHKSYVPNMISG
ASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVTKLLVVVNKMDDPTVNWSKE
RYDEIESKMVPFLRSSGYNVKKDVQFLPISGLLGSNLKTRMEKSVCPWWNGPCLFETLDA
VEVPPRDPNGPLRMPIIDKFKDMGTVVMGKIESGSIREGDNLLIMPNKAAVKVLAIFCDE
DKVRHVGPGENVRVRLSGVEEDDILSGFVLCSVAKPIHAVTEFVAQLQILELLDNAIFTA
GYKAVLHIHSVVEECEIVELMQQIDLKTKKPMKKKPLFVKNGAIVLCRVQVNNLICVEKF
SDFAQLGRFTLRTEGKTVAVGKITALPTVADNA

Transcript Sequence

Gene sequence data has not been registered.